Hierarchy For All Packages

Package Hierarchies:

starfish.chemistry, starfish.chemistry.io, starfish.chemistry.search

Class Hierarchy

• java.lang.Object
  • javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
    • com.onemoonscientific.swank.SwkTableModel (implements javax.swing.event.TableModelListener)
      • starfish.tables.NvTableModel
        • starfish.chemistry.AngleConstraintTable (implements starfish.chemistry.ConstraintTable)
        • starfish.chemistry.MoleculeTableModel
        • starfish.chemistry.NOEConstraintTable (implements starfish.chemistry.ConstraintTable)
  • starfish.chemistry.AngleConstraint (implements starfish.chemistry.Constraint)
  • starfish.chemistry.AngleConstraintCmd (implements tcl.lang.Command)
  • starfish.chemistry.AngleConstraintSet (implements starfish.chemistry.ConstraintSet, java.lang.Iterable<T>)
  • starfish.chemistry.io.ARIARestraintReader
  • starfish.chemistry.Atom (implements java.io.Serializable)
  • starfish.chemistry.AtomCmd (implements tcl.lang.Command)
  • starfish.chemistry.AtomColors
  • starfish.chemistry.AtomEquivalency
  • starfish.chemistry.AtomParser
  • starfish.chemistry.AtomProperty
  • starfish.chemistry.AtomUtil
  • starfish.chemistry.BioPPMScoreCmd (implements tcl.lang.Command)
  • starfish.chemistry.Bond (implements java.io.Serializable)
  • starfish.chemistry.search.BroadSearch
  • starfish.chemistry.io.ConstraintSTARWriter
  • starfish.chemistry.io.CoordinateSTARWriter
  • starfish.chemistry.CoordSet
  • starfish.chemistry.search.CoordSet
  • starfish.chemistry.DisConCmd (implements tcl.lang.Command)
  • starfish.chemistry.DistanceConstraint (implements java.io.Serializable)
  • starfish.chemistry.DistanceRange
  • starfish.chemistry.DistanceStat
  • starfish.chemistry.Entity (implements java.io.Serializable, starfish.star.STAR3Processor)
    • starfish.chemistry.Compound
      • starfish.chemistry.Residue
    • starfish.chemistry.Polymer
      • starfish.chemistry.Water
  • tcl.lang.Extension
    • starfish.chemistry.ChemistryExt
    • starfish.chemistry.search.MolSearchExtension
  • starfish.chemistry.io.FFDReader
  • starfish.chemistry.io.FFDWriter
  • starfish.chemistry.IdPeakCmd (implements tcl.lang.Command)
  • starfish.chemistry.MatchCriteria
  • starfish.chemistry.search.MBTree
  • starfish.chemistry.io.MMcifCmd (implements tcl.lang.Command)
  • starfish.chemistry.io.MMcifReader
  • starfish.chemistry.search.MNode (implements java.lang.Comparable<T>)
  • starfish.chemistry.Molecule (implements java.io.Serializable)
  • starfish.chemistry.Molecule.SpatialSetIterator (implements java.util.Iterator<E>)
  • starfish.chemistry.MoleculeCmd (implements tcl.lang.Command)
  • starfish.chemistry.MoleculePrimitives
  • starfish.chemistry.MolFilter
  • starfish.chemistry.search.MTree
  • starfish.chemistry.Noe (implements starfish.chemistry.Constraint, java.io.Serializable)
  • starfish.chemistry.NoeCalibration
  • starfish.chemistry.NoeCmd (implements tcl.lang.Command)
  • starfish.chemistry.NoeSet (implements starfish.chemistry.ConstraintSet, java.lang.Iterable<T>)
  • starfish.chemistry.OrderSVD
  • starfish.chemistry.io.PDB
  • starfish.chemistry.io.PDBCmd (implements tcl.lang.Command)
  • starfish.chemistry.Point3 (implements java.io.Serializable)
  • starfish.chemistry.PPMScore
  • starfish.chemistry.PPMv (implements java.io.Serializable)
  • starfish.chemistry.ResidueCmd (implements tcl.lang.Command)
  • starfish.chemistry.SpatialSet
  • starfish.chemistry.SpatialSetGroup
  • starfish.chemistry.io.StructureWriteCmd (implements tcl.lang.Command)
  • starfish.chemistry.SuperMol
  • starfish.chemistry.Tube

Interface Hierarchy

• starfish.chemistry.Constraint
• starfish.chemistry.ConstraintColumns
• starfish.chemistry.ConstraintSet
• starfish.chemistry.ConstraintTable

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • starfish.chemistry.NOEColumns (implements starfish.chemistry.ConstraintColumns)
    • starfish.chemistry.DistanceRange.Status
    • starfish.chemistry.Constraint.GenTypes
    • starfish.chemistry.AngleConstraintColumns (implements starfish.chemistry.ConstraintColumns)