starfish.chemistry.search
Class BroadSearch

java.lang.Object
  starfish.chemistry.search.BroadSearch

public class BroadSearch
extends java.lang.Object

Field Summary

byte[]

scores

Constructor Summary

BroadSearch(int size)

Method Summary

int	getScore(int index)
void	listStartPoints()
int	score(int iStart, int[] search)
void	set(int index, int nMatch, byte[] code)
void	setDictionary(int index, byte[] code)
int[]	uncompressCodes(byte[] code, int n)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

scores

public byte[] scores

Constructor Detail

BroadSearch

public BroadSearch(int size)

Method Detail

set

public void set(int index,
                int nMatch,
                byte[] code)

getScore

public int getScore(int index)

setDictionary

public void setDictionary(int index,
                          byte[] code)

uncompressCodes

public int[] uncompressCodes(byte[] code,
                             int n)

listStartPoints

public void listStartPoints()

score

public int score(int iStart,
                 int[] search)