starfish.chemistry
Class Water

java.lang.Object
  starfish.chemistry.Entity
      starfish.chemistry.Polymer
          starfish.chemistry.Water

All Implemented Interfaces:

java.io.Serializable, starfish.star.STAR3Processor

public class Water
extends Polymer

See Also:

Serialized Form

Field Summary

Fields inherited from class starfish.chemistry.Polymer

entityCompIndexLoopStrings, entityPolySeqLoopStrings, firstResidue, lastResidue, residues, residueVector

Fields inherited from class starfish.chemistry.Entity

assemblyID, chemicalExchangeState, conformationalIsomer, coordSets, details, entityAssemblyLoopStrings, entityCommonNameLoopStrings, entityID, entityStrings, firstAtom, firstBond, label, lastAtom, lastBond, magneticEquivalenceGroupCode, molecule, name, physicalState, role

Constructor Summary

Water(java.lang.String name)

Method Summary

Methods inherited from class starfish.chemistry.Polymer

addResidue, addResidueOld, finishSaveFrameProcessing, getNomenclature, getOneLetterCode, getPolymerType, getResidue, getResidue, getResidues, getStrandID, removeResidue, renumberResidue, setNomenclature, setPolymerType, setStrandID, writeEntitySeqSTAR3

Methods inherited from class starfish.chemistry.Entity

addCommonName, addComponents, addCoordSet, finishSaveFrameProcessing, getCoordSets, getFirstAtom, getIDNum, getName, hasEquivalentAtoms, processLoop, setHasEquivalentAtoms, setIDNum, writeEntityCommonNamesSTAR3, writeEntityHeaderSTAR3

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Water

public Water(java.lang.String name)