Uses of Class
starfish.chemistry.SpatialSet

Packages that use SpatialSet

starfish.chemistry

Uses of SpatialSet in starfish.chemistry

Fields in starfish.chemistry declared as SpatialSet

SpatialSet	Atom.defaultSpatialSet
SpatialSet[]	AngleConstraint.spSets

Methods in starfish.chemistry that return SpatialSet

SpatialSet	Atom.getDefaultSpatialSet()
SpatialSet	SpatialSetGroup.getFirstSet()
SpatialSet	AngleConstraint.getSpatialSet(int i)
static SpatialSet	Molecule.getSpatialSet(tcl.lang.Interp interp, MolFilter molFilter)
SpatialSet	Atom.getSpatialSet(java.lang.String spatialSetName)
SpatialSet	Molecule.SpatialSetIterator.next()

Methods in starfish.chemistry with parameters of type SpatialSet

void	SpatialSetGroup.add(SpatialSet spSet)
static DistanceRange	DistanceRange.calcDistanceRange(SpatialSet sp1, SpatialSet sp2, int structNum)
static DistanceRange	DistanceRange.calcMinDistance1(SpatialSet[] spSets, int structNum)
static DistanceRange	DistanceRange.calcMinDistance2(SpatialSet[] spSets, int structNum)
java.lang.String	Atom.ppmToString(tcl.lang.Interp interp, SpatialSet spatialSet, int iStruct, int iAtom)
java.lang.String	Atom.ppmToXMLString(tcl.lang.Interp interp, SpatialSet spatialSet, int iPPM, int iAtom)
double	Atom.rmsAtom(SpatialSet spatialSet)
java.lang.String	Atom.xyzToFFDString(tcl.lang.Interp interp, SpatialSet spatialSet, int iStruct, int iAtom, java.lang.String resNum)
java.lang.String	Atom.xyzToString(tcl.lang.Interp interp, SpatialSet spatialSet, int iStruct, int iAtom)
java.lang.String	Atom.xyzToXMLString(tcl.lang.Interp interp, SpatialSet spatialSet, int iStruct, int iAtom)

Constructors in starfish.chemistry with parameters of type SpatialSet

AngleConstraint(SpatialSet[] spSets)

AngleConstraint(java.lang.String name, SpatialSet[] spSets)

Noe(starfish.datasets.peaks.Peak p, SpatialSet sp1, SpatialSet sp2, double newScale)

SpatialSetGroup(SpatialSet spSet)