HHMI (UMBC) NMRView3 scripts
Alphabetical listing of commands
- fat: makes a spectral window "fat" so
that it fills more of the frame.
- fold:folds a frequency until it is within
the spectral width of an experiment
- fp: finds peaks that match two ppm values
to within specified tolerances.
- getlim get the limits of what is drawn
in the active window
- getppm: gets the chemical shift of an atom
from a peaklist or the assignment table
- jx jump to a specific point on the
x-axis
- jxy jump to a specific point on the
x- and y-axes
- jxyz jump to a specific point on the
x-, y- and z-axes
- jxz jump to a specific point on the
x- and z-axes
- jy jump to a specific point on the
y-axis
- jyz jump to a specific point on the
y- and z-axes
- jz jump to a specific point on the
z-axis, and optionally z2-axis
- jz2 jump to a specific point on the
z2-axis
- limitsrch: search for restraints to
an atom
- mda stores the location of matrices that
can be found in DATPATH
- mkasn copy assignments from a peak list to
the assignment table
- mkstrips: takes a window and makes
stripchart subwindows in it.
- nj: jump to the x and z coordinates of an
amide proton/nitrogen pair
- nw: makes a new window with an optional
geometry specification to create subwindows.
- overwrite prompt the user for
whether or not a file should be overwritten
- pick: peak picking; Obsolete, use
pkpick: instead
- pkpick: peak picking
- pname: get the name of a window's
parent window
- rdwin: reads saved window and session files
- save: saves all open spectral windows
- setlim set the limits of what is drawn
in the active window
- snj: make a strip window for consecutive
residues
- uplsrch: search for restraints to an atom
- wcopy: copy information about a spectral
window to a holding area for later use by
wpaste
- wintitle: sets the title bar of a
window like in NMRView 2.1
- wpaste: paste information put in the
holding area by wcopy into a window
- wrall: write all spectra within the
parent of the active window
- wrw: write one or all spectra that are
inside a single frame
- wrwin: save one or more spectra to a file